16 bit to 32 bit conversion now codes C24 through c27

Without the PC III as it would not run with it, Bike also has a PC II and a Air shifter, Not sure why its running 2 power commanders, previous owner told me he had to with the turbo? I am hoping with the flash software I got I can atleast tune out one of them. Mind you just did the 32 bit conversion also. Bike does run fine, or so it seems. Reason why I did the 32bit conversion as I yanked the engine out to do the inner clutch slave cylinder seal and had to split the case.
What year is the bike??
As for the PC2, im pretty sure it will not work the the 32 bit stuff.
Sound like a new complete tune!
As for the codes, if the bike is a 99 or 00, the crank trigger wires are reversed for the 32 bit conversion.